PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH90679.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 267aa    MW: 29099.6 Da    PI: 9.89
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH90679.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.63.4e-09210254345
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 
                       W++  +  lv+a k ++++   +W+++++ ++ g+t +qck ++ 
       MCH90679.1 210 VWSAVQERALVQALKTFPKEanqRWERVSAAVP-GKTVNQCKKKFA 254
                      6********************************.********9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MEGIELLEQA EALRDAVSSK KHVIDEKSNQ QNGSVKANGS SSSLAGYXXX XXXXXXXXXX  60
XXXXXXXXXX XXGTSRRWEV VSEYIGTGRS VEEIMKATKT VLLQKPDTAK AFDTFLEKRK  120
PAAQSIASPL STREELEGVS IPATTPENSA AFSTTTTTTT IPTPVATSKT TPTPVATTKT  180
TPTPPTMTTT TATTNNISSE ESQGVSEPEV WSAVQERALV QALKTFPKEA NQRWERVSAA  240
VPGKTVNQCK KKFAMMKENF RNKKTAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11450.13e-61MYB family protein