PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCH90780.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

BES1

Protein Properties

Length: 240aa MW: 25835.8 Da PI: 6.3514

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCH90780.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	28	7.1e-09	15	71	83	134
DUF822 83 gssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa.....a 134 g+ ++++p ss++ s+ ss+++sp++sy+ sp+sssfpsps++d +++as+ MCH90780.1 15 GAGNRNNPFSSQNPSPLSSSFPSPIPSYQVSPSSSSFPSPSRMDANNSASNlfpygR 71 55567889999999********************************99976554432 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MKTEQGTRAA TPGDGAGNRN NPFSSQNPSP LSSSFPSPIP SYQVSPSSSS FPSPSRMDAN 60 NSASNLFPYG RTVFPNMCLP PLRISNSAPV TPPISSPTSR NPKPMIPTWE SIAKASASSF 120 NHPLFAASAP TSPSHRHLYA PPTIPECDES DTSTVESGQW LNFQAFANAA KSVSPTLNFM 180 KPVINEQHNM VPDTDSRMQE MRISEPEFGV QVVKPWVGER IHEVGLDDLE LTLGNGKAPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75080.2	4e-58	BES1 family protein