PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH90815.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family FAR1
Protein Properties Length: 343aa    MW: 39348.2 Da    PI: 9.8482
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH90815.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR132.43e-1061140790
        FAR1   7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 A+++GF++++ ks +  +n++    t+ C+++g+++   +k   +r+ +++ ++gC  +++    k+g w v+ l+  HnH +a
  MCH90815.1  61 ANNLGFTTVILKSDNG-NNKRNPFVTLGCQRNGEKKAYVNK---KREATTTLKCGCLFMVRSYHLKSGGWTVSVLNGTHNHVMA 140
                 8899******998887.67778899********99998776...6666666666666666666666***************876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MDKPSTSRAI VVSSKGDDKG DVQKKKKPMD VQPTADLSAH FATDKQFTTR EKFKDWADVV  60
ANNLGFTTVI LKSDNGNNKR NPFVTLGCQR NGEKKAYVNK KREATTTLKC GCLFMVRSYH  120
LKSGGWTVSV LNGTHNHVMA QRQEGHIYAE RLEPEEIELV REMTKNRAPP RNILSTVRRK  180
YPSTWTTIKH IYNLRQRLRL EVRGERTEMQ QLLKCLSGGK YTYNTRLCRD TETISDIFFA  240
HPESIKLFNL FHIVLVMEST YKTNKYGFPL LEFVGNTSTE QTFSVGFAFM TAEKEDHFIW  300
ALQKCRDLLR CADDVKVVVT DREGALMNAV EKVFPKATDL LCR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12454KKKKPMDVQPTADLSAHFATDKQFTTREKFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.19e-16FAR1 family protein