PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH91245.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 157aa    MW: 17511.9 Da    PI: 9.6156
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH91245.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.66.8e-143377147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +W+ eE++++++a +++  + Wk+I   +g  +t  q++s+ qky
       MCH91245.1 33 RESWSDEEHDKFLEALQLFDRD-WKKIEDFVG-SKTVIQIRSHAQKY 77
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MATPTPAPAP APTSGGDASG KKIRKPYTIT KSRESWSDEE HDKFLEALQL FDRDWKKIED  60
FVGSKTVIQI RSHAQKYFLK VQKNGTLAHV PPPRPKRKAI HPYPQKATKN VLLPLPASIA  120
YGSSTNSLLP AGYVTWDETS MLMDNCQDEL NNLHGNE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.17e-74MYB_related family protein