PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH91391.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ARR-B
Protein Properties Length: 203aa    MW: 23030.2 Da    PI: 5.1658
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH91391.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like772.4e-24135186153
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 
                 kpr++W+ +LH++Fv av+qL G ekA+Pk+il+lm+ + Lt+e+v+SHLQ Y
  MCH91391.1 135 KPRVVWSVDLHRKFVFAVNQL-GLEKAVPKKILDLMNDERLTRENVASHLQVY 186
                 79*******************.*****************************99 PP
2Myb_DNA-binding32.12.6e-10137186147
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqky 47 
                      r  W+ +++ ++v av+qlG +   +k+I   m+ +++t++++ s++q y
       MCH91391.1 137 RVVWSVDLHRKFVFAVNQLGLEkaVPKKILDLMNdERLTRENVASHLQVY 186
                      678*********************************************98 PP
3Response_reg37.61.2e-1315851109
                   SSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS
  Response_reg  51 iempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109
                   ++mp+mdG++ll+    e ++lp+i++++h + +++ + ++ Ga d+l Kp+  eel +
    MCH91391.1   1 VDMPDMDGFKLLEMVGLE-MDLPVIMLSGHRDRNMVFKGISHGACDYLLKPVRLEELQN 58 
                   57**********998554.48***********************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
VDMPDMDGFK LLEMVGLEMD LPVIMLSGHR DRNMVFKGIS HGACDYLLKP VRLEELQNIW  60
QHVVRKQTTA SKDQNKASNE DRNPNISGGN SQNVLENIAE QNKNLGKRRK DQAEEEENEE  120
GEGTGDEDDP SLQKKPRVVW SVDLHRKFVF AVNQLGLEKA VPKKILDLMN DERLTRENVA  180
SHLQVYILNV AATIILVFSL LQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-65ARR-B family protein