PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH91606.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family B3
Protein Properties Length: 160aa    MW: 17620 Da    PI: 8.9416
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH91606.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.41.3e-2323122197
                 EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f kvlt+sd++++g +++ kk a+e+       ++ +  +++l+ +d+++ +W +k+i+r++++r++lt+GW+ Fv +++L +gD++vF   + +++el
  MCH91606.1  23 FSKVLTNSDTSTHGGFSIHKKPATEClppldlsQSTP--TQELVARDLHNYEWHFKHIFRGHPRRHLLTTGWSTFVTSKRLVAGDTFVFL--RGENGEL 117
                 88****************************9754444..458************************************************..4499999 PP

                 EEEEE CS
          B3  93 vvkvf 97 
                 +v+v+
  MCH91606.1 118 RVGVR 122
                 **997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MQTEPTSLDP CPAEPPRPKT HSFSKVLTNS DTSTHGGFSI HKKPATECLP PLDLSQSTPT  60
QELVARDLHN YEWHFKHIFR GHPRRHLLTT GWSTFVTSKR LVAGDTFVFL RGENGELRVG  120
VRHLASPQSC MPSSVISGQS MHLGVLATAS HAVATQTLFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46530.26e-84ARF family protein