PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH91614.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family GRAS
Protein Properties Length: 187aa    MW: 21667.8 Da    PI: 7.3409
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH91614.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS189.62.1e-5826184214374
        GRAS 214 ldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetl 312
                  ++++s+  +++++L+++++lsPkv+vv+eq+++hn++++++r+leal+ y+alfd+le+++pr+s er  vE++l+g+ei+n++aceg er+erhe+l
  MCH91614.1  26 SSSPASI--TIENFLNALWNLSPKVMVVTEQDSNHNGSTLMDRLLEALYSYAALFDCLESTVPRTSLERLRVEKMLFGEEIKNIIACEGLERKERHEKL 122
                 2233333..5699************************************************************************************** PP

        GRAS 313 ekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  kW +r++   F+ vpls++   qa++ l+ ++  gy+++ee+g++v++W+dr+L+s+SaWr
  MCH91614.1 123 DKWFMRFDFTRFGHVPLSYFGRLQARRFLQSCGCAGYKMKEENGCVVIYWQDRSLFSISAWR 184
                 *************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MNQTSLGDLF EKDMVNGYTR SLESTSSSPA SITIENFLNA LWNLSPKVMV VTEQDSNHNG  60
STLMDRLLEA LYSYAALFDC LESTVPRTSL ERLRVEKMLF GEEIKNIIAC EGLERKERHE  120
KLDKWFMRFD FTRFGHVPLS YFGRLQARRF LQSCGCAGYK MKEENGCVVI YWQDRSLFSI  180
SAWRAMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.11e-83GRAS family protein