PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCH91655.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

bHLH

Protein Properties

Length: 56aa MW: 6205.11 Da PI: 6.5079

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCH91655.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	19.8	1.4e-06	3	34	18	54
HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +++ L++l+ + +K + a++L +A+eYIk L MCH91655.1 3 DRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 34 6888999999987.....8****************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 56 aa Download sequence
MGDRITALQQ LVSPFGKTDT ASVLSEAIEY IKFLHEQVTV LSTPYMKSGA PIQHQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20640.1	1e-29	bHLH family protein