PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH92272.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 214aa    MW: 23566.3 Da    PI: 5.6496
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH92272.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.11.7e-12246347
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +WT+eE+  ++ + ++lG+g+W+ Iar     Rt+ q+ s+ qky
       MCH92272.1  2 PWTEEEHRMFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKY 46
                     8*****************************89************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
TPWTEEEHRM FLLGLQKLGK GDWRGIARNY VISRTPTQVA SHAQKYFIRQ SNVSRRKRRS  60
SLFDIVADDA ETEGNNPLPA PPPLDEECES MDSTNSNDGE SASAPLMPDS NAQASSYPLV  120
YPAYYSPFFP FPLPYWSGYS PELAPKKETH EVVKPTPVHS KSPINVDELV GMSKLSLGET  180
IGDAGPSTLS RKLLEEGPSR QSAFHTTPAC GTVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.15e-67MYB_related family protein