PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH92285.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ERF
Protein Properties Length: 193aa    MW: 22067.7 Da    PI: 10.5569
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH92285.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.55.3e-164995352
         AP2  3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkk 52
                ++GVr ++ +g+++AeIrd    + k +r++lg+f tae Aa a+++a+  
  MCH92285.1 49 FRGVRTRP-WGKFAAEIRDsT--R-KGARVWLGTFHTAEAAALAYDQAAFL 95
                8****999.**********32..2.24*********************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MMMILTSSTT HNHKRKNYYX XXXXXXXXXX XXXXXXXXXX XXXXNKRPFR GVRTRPWGKF  60
AAEIRDSTRK GARVWLGTFH TAEAAALAYD QAAFLTRGSS AVLNFPEAIV KASLKEMAKN  120
SKPLEEGTSP VXXXXXKHTM RKRSNKVIKK KIKSDYHSDQ IQTQIKDNTD SENVLVLEDL  180
GTEYLEQLLS VTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.16e-33ERF family protein