PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH92394.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family FAR1
Protein Properties Length: 132aa    MW: 15062.1 Da    PI: 6.3552
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH92394.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR154.63.7e-1757130173
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekd 73 
                 ++Y +YAk+ GFs r+ + +ks+++g ++ ++  Cskeg+r++++ k ++ +   + etr+gCka+l +kk++d
  MCH92394.1  57 NYYVSYAKKKGFSFRMGRVTKSRTDGVVIGQQILCSKEGFRSNKNLKkENGSLIVHDETRVGCKAMLYIKKKED 130
                 69***************************************9998772334445899*************9964 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
MTDHEMVDMH EHTTMISSDE IHESAIDADP LNDRISSELA LEPFEGMEFA SIEDVKNYYV  60
SYAKKKGFSF RMGRVTKSRT DGVVIGQQIL CSKEGFRSNK NLKKENGSLI VHDETRVGCK  120
AMLYIKKKED RP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.21e-18FAR1 family protein