PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH92541.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NF-YA
Protein Properties Length: 156aa    MW: 16864 Da    PI: 6.6751
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH92541.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA45.23.1e-1425493458
   CBFB_NFYA 34 srkpylheSRhkhAlrRpRgsgGrF 58
                s +pylheSRh+hA+rR+Rg+gGrF
  MCH92541.1 25 SLQPYLHESRHQHAMRRARGTGGRF 49
                569*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MCQENVLNET EHDSIRIQGY ANIYSLQPYL HESRHQHAMR RARGTGGRFA KKTDGEGSNN  60
SGKDNGSGPV LSSQSISSSG SEPLPSDSAE TWNSPNMRQD ARASNENGGG SYHSNNNGMQ  120
SSRYQGERVD DGGDCSGQLR GSISSNEASQ RRLAIQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.11e-16NF-YA family protein