PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH92836.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family AP2
Protein Properties Length: 115aa    MW: 13306.2 Da    PI: 9.9736
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH92836.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.25.3e-106498138
         AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgt 38
                s+y+GV +++ +grW+A+I   +   g +k+ +lg++g 
  MCH92836.1 64 SKYRGVARHHHNGRWEARIGKvF---G-NKYLYLGTYGK 98
                89****99**********99966...3.6*********7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    
AYDNEETAAH AYDLAALKYW GQDTIINFPL SNYQKELIEM ESQSREEYIG SLRRKSSGFS  60
RGVSKYRGVA RHHHNGRWEA RIGKVFGNKY LYLGTYGKFK IIMSQILTPI LLLTK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.21e-54ERF family protein