PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCH92863.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

LBD

Protein Properties

Length: 195aa MW: 22203.2 Da PI: 4.5085

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCH92863.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	31.4	5.2e-10	1	43	58	100
DUF260 58 msslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 m+++++++++ra+dPv G+++ i++lq q+e k el+l+ ++ MCH92863.1 1 MRTIIFQSDMRANDPVGGCYKYIQDLQAQIEYCKIELDLVLQQ 43 89**********************************9998776 PP

Sequence ? help Back to Top
Protein Sequence Length: 195 aa Download sequence
MRTIIFQSDM RANDPVGGCY KYIQDLQAQI EYCKIELDLV LQQLAVFRAQ SHPQQQQQQQ 60 XQQQQQQQMV NYGDQVIMNS DSLLGFYNPS GSVVPATAPA HYHYNVQQVV TPLQEHEQEQ 120 YLMMNESNSS INSTTTLQQH INNWGAMQNS ISLSSLSLHG QSSNASDEYD HKPTLDIPCD 180 ERNELGFDSG EILHH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13850.1	5e-17	LBD family protein