PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH92949.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family FAR1
Protein Properties Length: 209aa    MW: 23436.8 Da    PI: 8.0136
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH92949.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR126.52.1e-0875156790
        FAR1   7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                 A+++ F v++ +s +    ++  k  + C ++g  ++++kk   + +++ + ++gCk kl+ + +  ++ w+++ l+  HnHel 
  MCH92949.1  75 AEKLRFAVVILNSDYG-SGRRKQKLVLGCERNGVYKRTSKK--IKFEETGTRKCGCKFKLRGNFHVtTNDWHISVLNGIHNHELD 156
                 7788999999888776.4445678999********999988..7788889999****99999988889***************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MDHESRQVVL GIAVHEVVAE ADPVICDPPA IESSQPPAIE INHAPAIGID TSSSFATVEA  60
FKDRDSLITW VRGVAEKLRF AVVILNSDYG SGRRKQKLVL GCERNGVYKR TSKKIKFEET  120
GTRKCGCKFK LRGNFHVTTN DWHISVLNGI HNHELDKELD GHLVAGRLKP KEMEVVAEMT  180
RNLVPPRNIM TTLKERDPDN VTDIKQLYN