PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCH93760.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

FAR1

Protein Properties

Length: 388aa MW: 44779.9 Da PI: 6.5072

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCH93760.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.6	3.3e-21	63	156	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+++Ak++GFs+r+++++ + + t+r fvC + g++ ++++++k +r+r+++r+gC+a ++++k++ +w+vt + ++HnHel MCH93760.1 63 EFYSDFAKSCGFSIRRHRTEGKdGVGKGLTRRYFVCHRAGNTPAKSTTETKPQRNRKSSRCGCQAYMRISKTTefgPPEWRVTGFGNHHNHELL 156 6************9998877356667999***********999******************99777789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MSEEVGSMLA VYDDPSDQHS LSFGGDTSST EESPGETRLS LQPTNDHIPY IGQRFSTHDE 60 AYEFYSDFAK SCGFSIRRHR TEGKDGVGKG LTRRYFVCHR AGNTPAKSTT ETKPQRNRKS 120 SRCGCQAYMR ISKTTEFGPP EWRVTGFGNH HNHELLEPNQ VRFLPAYRTI SDVDKNRILM 180 FAKTGISVHQ MMRLMELEKC VEPGYLPFTE KDVRNLLQSF RKLDPEEESL DLLRMCRNIK 240 ERDPNFKFEY TLDANNRLEN IAWSYASSIQ LYDIFGDAVV FDTTHRLTAF DMPLGIWVGI 300 NNYGMPCFFG CVLLRDETVR SFSWAIKVVN EELISVCNVW FFIQIVLWPL GFFSEIILVL 360 LICDMTTRFF IEDCVAIKNN ALSRNRIY

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MSEEVGSMLA VYDDPSDQHS LSFGGDTSST EESPGETRLS LQPTNDHIPY IGQRFSTHDE  60
AYEFYSDFAK SCGFSIRRHR TEGKDGVGKG LTRRYFVCHR AGNTPAKSTT ETKPQRNRKS  120
SRCGCQAYMR ISKTTEFGPP EWRVTGFGNH HNHELLEPNQ VRFLPAYRTI SDVDKNRILM  180
FAKTGISVHQ MMRLMELEKC VEPGYLPFTE KDVRNLLQSF RKLDPEEESL DLLRMCRNIK  240
ERDPNFKFEY TLDANNRLEN IAWSYASSIQ LYDIFGDAVV FDTTHRLTAF DMPLGIWVGI  300
NNYGMPCFFG CVLLRDETVR SFSWAIKVVN EELISVCNVW FFIQIVLWPL GFFSEIILVL  360
LICDMTTRFF IEDCVAIKNN ALSRNRIY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein