PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH93805.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family C2H2
Protein Properties Length: 246aa    MW: 27943.8 Da    PI: 7.8545
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH93805.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H225.63.1e-086687223
                EETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                 C++Cgk F+r+ nL+ H+r H
  MCH93805.1 66 FCEICGKGFTRNANLRMHMRAH 87
                6*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MCYKTCDEND TLLTTYPATI TVPPTNCYRT HGENNNCVND AVMNSTIDSD IVELDAVELL  60
ANHFHFCEIC GKGFTRNANL RMHMRAHGEK FKTPESLRCA RETRLSATRF SCPFDGCKRN  120
RVHKKFTPLK SVLCLRNHFK RSHCPKTHTC DRCRKKSFAV VSDLKSHVKQ CKGESTWKCS  180
CGTTFSRKEK LFGHVERFEG HSPAVVEVGD ESMAAEECVG QILTKESDCL DGLPEGFFDD  240
LDKFWV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34370.33e-64C2H2 family protein