PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH93892.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ERF
Protein Properties Length: 175aa    MW: 20175.3 Da    PI: 5.3751
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH93892.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.63.6e-192071256
         AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                +y+GVr+++ +g+++AeIrdp     k +r++lg+f taeeAa+a+++a+ +++g+
  MCH93892.1 20 RYRGVRRRP-WGKYAAEIRDP---ArKGARVWLGTFLTAEEAARAYDRAAFEMRGA 71
                59*******.**********8...4445**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MEEEISKEKN DKQESPKEIR YRGVRRRPWG KYAAEIRDPA RKGARVWLGT FLTAEEAARA  60
YDRAAFEMRG ALAILNFPHE YPFLNSSSSS SSSLAPNPHS SSSYESLLPS NYQNEHGKEV  120
IEFECLDDKL LEELLDCDES ETTTHKNLPK XXXXXXXXXX XXXENLVKHE MCFKM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23220.12e-25ERF family protein