PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH93897.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family WRKY
Protein Properties Length: 260aa    MW: 28675.5 Da    PI: 10.8636
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH93897.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY31.82.8e-10240260222
                 --SS-EEEEEEE--TT-SS-E CS
        WRKY   2 dDgynWrKYGqKevkgsefpr 22 
                  D+++WrKYGqK++kgs++pr
  MCH93897.1 240 ADEFSWRKYGQKPIKGSPYPR 260
                 69******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
PVMIPKMRMQ EQMAIEEAAS AGMKSMEHFI RVLSSSSSSS SSSDQRSRLD LVNKLDCTEI  60
TDFTVSKFKQ VINLLNRTGH ARFRRAPSNF SSSTSSSQFQ SQIQSEKFNP QPQSTTLVFA  120
KPTQTVKPIP NLKPKQNQST DLSVSQYSKS KEAYSVSTTT SSFLSTITGD GSVSDGKIGP  180
IISSGKPPLA SSXXXXXXXX XXXXXXXXSG PCHCSKRRKS RVKRTIRVPA ISSKVADIPA  240
DEFSWRKYGQ KPIKGSPYPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.12e-59WRKY family protein