PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH94255.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ERF
Protein Properties Length: 235aa    MW: 26188.8 Da    PI: 9.9011
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH94255.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.11.5e-20131181256
         AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                 +y+GVr+++ +g+W+AeIrd +     + +r++lg+f tae Aa+a+++a+++++g+
  MCH94255.1 131 KYRGVRQRP-WGKWAAEIRDpF-----KaARVWLGTFETAEAAARAYDEAALRFRGN 181
                 8********.**********66.....56*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MSAMISALTH IVSGDVPVTN GGDNNIHYNA IEERLGFTPN INMSSSSSSS SNYVTSSSLK  60
RTREEDDRSF GDQFLLHGGY YSPALPTTNA ESSRNRTTTT TRVTTTREMG NAVYEYKRTE  120
NVVREGEEKR KYRGVRQRPW GKWAAEIRDP FKAARVWLGT FETAEAAARA YDEAALRFRG  180
NKAKLNFPEN VTLRHPPTTS STNQWNVSNS NPPNSIVSIT TSTDPVVHTR PFTSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.19e-27ERF family protein