PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH94507.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 159aa    MW: 17387.8 Da    PI: 10.4539
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH94507.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding315.7e-10102146345
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 
                       W++  +  lv+a k ++++   +W+++a+ ++ g+t +qck ++ 
       MCH94507.1 102 VWSAVQERALVQALKTFPKEanqRWERVAAAVP-GKTVNQCKKKFA 146
                      6********************************.********9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MKATKTVLLQ KPDTAKAFDT FLEKRKPAAQ SIASPLTTRE ELEGVSVPTT TPENSAAFST  60
TTIPTPATTT KTIPTPLTTT TTTTTTNNIS LEESQGVSEQ EVWSAVQERA LVQALKTFPK  120
EANQRWERVA AAVPGKTVNQ CKKKFAMMKE NFRNKKTAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11450.12e-48MYB family protein