PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCH94628.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

C3H

Protein Properties

Length: 93aa MW: 9812.95 Da PI: 5.0031

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCH94628.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	40	6.4e-13	2	26	3	27
S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 3 telCrffartGtCkyGdrCkFaHgp 27 ++lC f++r+G+Ck+G++CkF H++ MCH94628.1 2 EPLCVFYSRYGICKFGPSCKFDHPM 26 79*********************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 93 aa Download sequence
GEPLCVFYSR YGICKFGPSC KFDHPMGIFT YNVPASPLAD ASGRRLLGSS SGTAALSLSS 60 EGLVESSSAK PRRLSLSETR PIPTGDDNID DEG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02830.1	6e-18	C3H family protein