PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH94804.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ARR-B
Protein Properties Length: 219aa    MW: 24706.1 Da    PI: 4.6427
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH94804.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like41.92.2e-13153198249
     G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSH 49 
                  r+ Wt +LH++F++av+   G++ A Pkti elm+v+gL    v   
  MCH94804.1 153 RRRTWTDDLHRKFLDAVQTA-GIN-APPKTIFELMDVEGLKKGTVSNY 198
                 699****************9.776.***************98877665 PP
2Response_reg28.76.9e-1128428109
                   EESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTT.HHHHHHHHHTTESEEEESS--HHHHHH CS
  Response_reg  28 eaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahge.eedalealkaGakdflsKpfdpeelvk 109
                   +a+ ++eal  + ek+  ++l+l+  ++p+m+ +e+++++++++  +   ++ta+++  + + +al+ Gak ++ Kp+ +++l +
    MCH94804.1   2 TATLASEALSVIGEKKneINLVLVEAQLPDMEIYEFVTKMKSSN--ISSFIITAYDDdIPSISQALRTGAKWCFRKPVRISDLQQ 84 
                   667788999999666667***********************977..8899999888879*********************99976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
ATATLASEAL SVIGEKKNEI NLVLVEAQLP DMEIYEFVTK MKSSNISSFI ITAYDDDIPS  60
ISQALRTGAK WCFRKPVRIS DLQQLWRFAV WNRFEPTISE EVFDYRWPLS EVVTNGLEYQ  120
PSLNTGEQSV ESVNGKAQES FDNKDTIVLL KTRRRTWTDD LHRKFLDAVQ TAGINAPPKT  180
IFELMDVEGL KKGTVSNYLK ADLGQLVCEA PTIGDLLLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.13e-16ARR-B family protein