PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH94829.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family bHLH
Protein Properties Length: 67aa    MW: 7813.05 Da    PI: 11.0391
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH94829.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.41.3e-131863555
                HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                h+++Er RR+ri +++  L+el+P+a      K +Ka++L + ++Y+k Lq
  MCH94829.1 18 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 63
                99***********************8.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 67 aa     Download sequence    
AQPRQKVRAR RGQATDPHSI AERLRRERIA ERMKALQELV PNANKTDKAS MLDEIIDYVK  60
FLQVQVK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12328RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24260.16e-27bHLH family protein