PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH94848.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family M-type_MADS
Protein Properties Length: 46aa    MW: 5210.16 Da    PI: 11.2225
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH94848.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF51.81e-161646131
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLC 31
                k+ +n+sn qvtfskRr g++KKA+EL++LC
  MCH94848.1 16 KKMSNESNLQVTFSKRRSGLFKKASELCTLC 46
                5789*************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 46 aa     Download sequence    
MSSGRKGKGR QKIEMKKMSN ESNLQVTFSK RRSGLFKKAS ELCTLC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.14e-21M-type_MADS family protein