PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH94890.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family Trihelix
Protein Properties Length: 249aa    MW: 26816.9 Da    PI: 9.545
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH94890.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix51.62.5e-1667156186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W++  + +Liea  e+  +l+rg+lk+++W+ev++ +       +  ++ +qCk++++ ++k+yk +k+    +   ++s++p++d+l+
  MCH94890.1  67 CWSEGATAVLIEAWGERYMELSRGNLKQKHWKEVAEIVngreDYLKAPKTDIQCKNRIDTVKKKYKSEKAKIAAGGGVTTSKWPFYDRLD 156
                 7*************************************97544455578999*******************9999999999*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MDDDDEIHSN PSPLSGSPVS SPGAIGRISV TVAAPAPESH PATNSYALAL PIQNQVRGNN  60
GGGREDCWSE GATAVLIEAW GERYMELSRG NLKQKHWKEV AEIVNGREDY LKAPKTDIQC  120
KNRIDTVKKK YKSEKAKIAA GGGVTTSKWP FYDRLDQLIG PTAKITGSTS AGNSNLPPQK  180
VPLGIPVGLR AGGGANQFNS QKKNQRPQPQ PQPQPQLNYQ KVQLRPRVVA VDSDNSSERE  240
ALSPVSSDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14180.12e-52Trihelix family protein