PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH95152.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 148aa    MW: 17163.1 Da    PI: 4.5746
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH95152.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.71.3e-083479346
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                     +WT+eE +l+ +a + + ++   +W ++a++++ g+t  +++  ++ 
       MCH95152.1 34 KWTQEENKLFENALAYYDKDtpdRWIRVAEMIP-GKTVGDVIKQYRE 79
                     8********************************.*******999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
MMLSRTMNRG IEVLSPASYI QNSNWLFEEN KGSKWTQEEN KLFENALAYY DKDTPDRWIR  60
VAEMIPGKTV GDVIKQYREL EEDVCVIEAG LIPVPGYTTS SFTLDWDNNQ GFDEFKQFCS  120
VGEKRGGSTR PSEQERKKGV PWTEEEHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.11e-73MYB family protein