PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH95369.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family AP2
Protein Properties Length: 93aa    MW: 10901.3 Da    PI: 10.4916
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH95369.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP224.28.2e-086393336
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkf 36
                y+GV+++++ grW A+I  +     +k  +lg+f
  MCH95369.1 63 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTF 93
                9***************988532...5******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    
MEEKAARAYD QAALKYWGPS THINFPLENY QNQLEEMKNM TRQEYVAHLR RKSSGFSRGA  60
SMYRGVTRHH QHGRWQARIG RVAGNKDLYL GTF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.18e-58AP2 family protein