PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCH95454.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

bHLH

Protein Properties

Length: 74aa MW: 8526.12 Da PI: 10.9006

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCH95454.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	17.6	6.8e-06	37	59	6	28
HHHHHHHHHHHHHHHHHHHCTSC CS HLH 6 nerErrRRdriNsafeeLrellP 28 +++Er RR ri +++ +L+el+ MCH95454.1 37 SIAERVRRTRISDRIRKLQELVX 59 689******************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 74 aa Download sequence
GVDDSANALD LKMDKILEDS VPCKIRAKRG FATHPRSIAE RVRRTRISDR IRKLQELVXX 60 XXXXXXXXXX XXXP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G35460.1	1e-15	bHLH family protein