PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCH95652.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

Trihelix

Protein Properties

Length: 141aa MW: 16371.4 Da PI: 9.5768

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCH95652.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	59.7	7.6e-19	65	139	1	80
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcp 80 +W+ +ev++Li++r+++ +r++ k +++lWee+s+ + + g++rsp qCk+ w +l +y+ ik+g+ r ++++ MCH95652.1 65 KWKAEEVKKLIDLRSDLRDRFKVVKGRMALWEEISQSLLADGISRSPAQCKSLWTSLVLKYEDIKNGKDTR-----KNWQ 139 7*****************************************************************99986.....3455 PP

Sequence ? help Back to Top
Protein Sequence Length: 141 aa Download sequence
DSVEFWKQFI ASSVEKSNKA NNGYVSRKEY KSNVKKDDSE DIDEAKSEEM SNAEPESSKS 60 VKKNKWKAEE VKKLIDLRSD LRDRFKVVKG RMALWEEISQ SLLADGISRS PAQCKSLWTS 120 LVLKYEDIKN GKDTRKNWQY L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	9e-23	Trihelix family protein