PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCH95768.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

BBR-BPC

Protein Properties

Length: 94aa MW: 10574.3 Da PI: 10.3018

Description

BBR-BPC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCH95768.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GAGA_bind	219.9	2.2e-67	1	94	208	301
GAGA_bind 208 lPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 +PvPvCsCtG++rqCYkWGnGGWqS+CCttt+S++PLP+ +++r+aRi+grKmS+++f +lL++ a+eG+dls p+DLkd+WA+HGtn+++ti+ MCH95768.1 1 MPVPVCSCTGVPRQCYKWGNGGWQSSCCTTTLSMHPLPQLPNKRHARIGGRKMSGSVFIRLLSRFASEGHDLSIPLDLKDYWARHGTNRYITIK 94 9********************************************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 94 aa Download sequence
MPVPVCSCTG VPRQCYKWGN GGWQSSCCTT TLSMHPLPQL PNKRHARIGG RKMSGSVFIR 60 LLSRFASEGH DLSIPLDLKD YWARHGTNRY ITIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38910.1	6e-60	BBR-BPC family protein