PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH95785.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family B3
Protein Properties Length: 144aa    MW: 15985.2 Da    PI: 10.1873
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH95785.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3825.6e-262103199
                 EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                 f+k+lt sd++++g +++p++ ae++      + +++ s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F   + +++el+
  MCH95785.1   2 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyS-QQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFL--RGDDGELR 97 
                 99****************************963.3445679************************************************..3489999* PP

                 EEEE-S CS
          B3  94 vkvfrk 99 
                 ++++r+
  MCH95785.1  98 LGIRRA 103
                 ***996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    
MFCKTLTASD TSTHGGFSVP RRAAEDCFPP LDYSQQRPSQ ELVAKDLHGL EWRFRHIYRG  60
QPRRHLLTTG WSAFVNKKKL VSGDAVLFLR GDDGELRLGI RRAVQLKSSG SFAAPSGMQL  120
DPGSLMDVVN ALSKRSAFSV CYNP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33860.12e-77ARF family protein