PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH95806.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family Nin-like
Protein Properties Length: 118aa    MW: 12846.3 Da    PI: 10.8028
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH95806.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK253.6e-0893117226
      RWP-RK   2 ekeisledlskyFslpikdAAkeLg 26 
                 ek++sl++l++yFs+++kdAAk++g
  MCH95806.1  93 EKNVSLSVLQQYFSGSLKDAAKSIG 117
                 89*********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    
MQKICKSLRT VSGAELSEIE SSQAGFEKNS VPSFPPSSKR KSRMTPFINE NHGSVQKLSS  60
KASNLRNNGN EPSSDQERNG PKRRGEKNRS SSEKNVSLSV LQQYFSGSLK DAAKSIGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59580.12e-17Nin-like family protein