PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH96039.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ERF
Protein Properties Length: 201aa    MW: 22566.1 Da    PI: 10.173
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH96039.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.83.7e-202068355
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++GVr ++ +gr++AeIrdp   gk++r++lg+f+taeeAa+a++ a+++++g
  MCH96039.1 20 FRGVRKRP-WGRYAAEIRDP---GKKTRVWLGTFDTAEEAARAYDTAAREFRG 68
                8*******.**********8...557************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
ITGPNPTAQA QTQAQKEIRF RGVRKRPWGR YAAEIRDPGK KTRVWLGTFD TAEEAARAYD  60
TAAREFRGSK AKTNFPTPME IINNRSPSQS STLESPSPPP XXXXXXXXXX XXXXXXXXXX  120
XXXXXXXXXX XXXXXXXAET KLSVVGRREM CGFDLPVTDF RRAAVQSSDS GSSSSVVDYE  180
RVPRQRHLDL DLNVPPPPEV A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.14e-26ERF family protein