PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH96224.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ERF
Protein Properties Length: 152aa    MW: 17006.2 Da    PI: 10.6429
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH96224.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.87.5e-2054104255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +ykGVr+++ +g+++AeIrdp++ng  +r++lg++ +ae+Aa a+++a+ kl+g
  MCH96224.1  54 RYKGVRRRP-WGKFAAEIRDPNKNG--ARVWLGTYQSAEDAALAYDRAAFKLRG 104
                 7********.***********8887..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    
MSFPGMSPAI NLNSPSSSTT DSGSRESTST TLHCDTENTR LTLRETHTLP CWRRYKGVRR  60
RPWGKFAAEI RDPNKNGARV WLGTYQSAED AALAYDRAAF KLRGSKAKVN FPHLIDSNVS  120
EPIGTRRAQE PTRLVPEPKK KASRVSVYDT LL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.11e-29ERF family protein