PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH96536.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family bHLH
Protein Properties Length: 176aa    MW: 19456.5 Da    PI: 8.8077
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH96536.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.67.1e-06134165236
                 HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS CS
         HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapsk 36 
                 ++ h ++Er+RR ++ ++f eL   +P +   ++k
  MCH96536.1 134 KTLHTMVERKRRLELAHKFIELSATIPRL---KKK 165
                 678************************98...444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MDIENWLEMC QKEEDYLGEY MVHQSSLEAP AVPVAAAAPE NIQEICYIPT VVSSEMSVCS  60
DKSPKLLHPS TSSKTCIISF DNSAVIPLKP SVISSKPPRP PCSARKRTSE KLKSSEAKAI  120
TKEGEKKILG SGSKTLHTMV ERKRRLELAH KFIELSATIP RLKKKHTSTN CAYIDA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1141146ERKRRL