PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH96725.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family bHLH
Protein Properties Length: 113aa    MW: 12572.1 Da    PI: 9.9892
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH96725.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.43.9e-1160108355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR++i +++  L+el+P +    +k   Ka +L + ++Y++sLq
  MCH96725.1  60 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 108
                 58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 113 aa     Download sequence    
NAEGDGVKDS PRKISDGSKE AEKKPKVEQS GKQTKDNSPS GDASKDNFIH VRARRGQATN  60
SHSLAERVRR EKISERMRLL QELVPGCNKI TGKAVMLDEI INYVQSLQQQ VEV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.11e-45bHLH family protein