PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCH97069.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

SBP

Protein Properties

Length: 211aa MW: 23582.4 Da PI: 10.2023

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCH97069.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132	2.1e-41	96	173	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C++dls+ak+yhrrhkvCe+hska+++l+ +++qrfCqqCsrfh l efDe+krsCrrrLa+hn+rrrk+q+ MCH97069.1 96 MCQVDNCKEDLSKAKDYHRRHKVCEAHSKASKALLGNQMQRFCQQCSRFHPLLEFDEGKRSCRRRLAGHNRRRRKTQP 173 6**************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
MLSNPFYNSS NNKKRDLSYD VVHIPNDNWN PKEWNWDSVR FTAKSTVSQQ QHSEETLKLN 60 LGGVVSGGVN SGVNGGVVNR ANKRVRSGSP TASYPMCQVD NCKEDLSKAK DYHRRHKVCE 120 AHSKASKALL GNQMQRFCQQ CSRFHPLLEF DEGKRSCRRR LAGHNRRRRK TQPDEVATSS 180 PPLNQQVVAA AANLEIFNLL TAIADGSQGM G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20980.1	2e-53	SBP family protein