PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH97208.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 175aa    MW: 19954.4 Da    PI: 4.7828
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH97208.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.27.6e-081232447
                     HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqky 47
                     W++Ia +++ gRt++++k++w+ +
       MCH97208.1  1 WSLIAGRLP-GRTANDVKNYWNAH 23
                     *********.***********976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
WSLIAGRLPG RTANDVKNYW NAHLLKKVXX XXXXXXXXXX XXXXMKAHEV IKPQPRTFST  60
NWLKEKHNNF VSQPVLASNK DDKIPTYHDD QSEIMVPNHI GIDCASSSKP CLGNAPIPCA  120
MSMDSLWNLE EPVGSEIIGS CSSVHEENYN NMEFPNVDDS FWDSNLYDFD SLWDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.16e-13MYB family protein