PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCH97310.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

LBD

Protein Properties

Length: 128aa MW: 14449.6 Da PI: 8.476

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCH97310.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	133.8	6.7e-42	7	106	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC+++C +apyf e+p++fanvh++FGasnv kllk+l+ ++reda++sl+yeAe r++dPvyG+vg+i+ lqq+l++ ++el+++k+ MCH97310.1 7 PCAACKYLRRKCTQECDFAPYFLPESPQRFANVHRVFGASNVAKLLKELNATDREDAVKSLAYEAESRIKDPVYGCVGLISMLQQRLKEIQHELHAAKK 105 7***********************************************************************************************998 PP DUF260 100 e 100 e MCH97310.1 106 E 106 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 128 aa Download sequence
MSSSNSPCAA CKYLRRKCTQ ECDFAPYFLP ESPQRFANVH RVFGASNVAK LLKELNATDR 60 EDAVKSLAYE AESRIKDPVY GCVGLISMLQ QRLKEIQHEL HAAKKELSSY NLNPQTMQYL 120 LTHPGTVI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	2e-58	LBD family protein