PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH97340.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NAC
Protein Properties Length: 139aa    MW: 16096.8 Da    PI: 10.1257
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH97340.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM37.57.1e-12645141
         NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiyk 41
                l pGfrFhPtd elv+++L +k+ g+k+++ +vi+e+diy+
  MCH97340.1  6 LIPGFRFHPTDVELVMYFLMRKIMGRKFPF-DVIAELDIYN 45
                579***************************.99******96 PP
2NAM751.8e-234411161129
         NAM  61 FskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                 + ++ kky+ g r nrat+ gyWk+tgkd+++ + +++lvg+ +tLvf+ g+apkg +tdWvmhe+rle
  MCH97340.1  44 YNPAGKKYSVGGRMNRATEIGYWKTTGKDRSIQH-NNQLVGMIRTLVFHIGKAPKGDRTDWVMHEFRLE 111
                 667889***************************9.999****************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MAEPKLIPGF RFHPTDVELV MYFLMRKIMG RKFPFDVIAE LDIYNPAGKK YSVGGRMNRA  60
TEIGYWKTTG KDRSIQHNNQ LVGMIRTLVF HIGKAPKGDR TDWVMHEFRL EDKYLADKGI  120
PQVNIFGRVY QLVVNCFVG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64060.12e-52NAC family protein