PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH97609.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family B3
Protein Properties Length: 106aa    MW: 12492.4 Da    PI: 9.7723
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH97609.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.73.6e-12281011895
                 --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
          B3  18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                 ++k+ +++hg++  ++ +       g+sW+v+l   ++++++ + kGW++F ++  +  gD++ F+l+++++  ++v+
  MCH97609.1  28 VSKEVLRRHGEE--CHGKFAELKVGGKSWSVRL--YRQQKGIRFYKGWSKFKEECIVGIGDTCFFELIDEKKLVFKVS 101
                 567777777644..555566667799*******..89999999************************99777755555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    
YEKGNSEGPN AMKHYTFEIV VNSLYPYVSK EVLRRHGEEC HGKFAELKVG GKSWSVRLYR  60
QQKGIRFYKG WSKFKEECIV GIGDTCFFEL IDEKKLVFKV SFERKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.13e-08B3 family protein