PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH98143.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ERF
Protein Properties Length: 145aa    MW: 15608.4 Da    PI: 10.7036
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH98143.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.91.4e-192272256
         AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                ++ GVr+++ +grWvAeI+d      ++ r +lg+f+taeeAa+a++ a+++l+g+
  MCH98143.1 22 RFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEEAARAYDTAARALRGA 72
                689******.7*********....4456*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MVAPVSDNGI RSRKKSSRGH HRFVGVRQRP SGRWVAEIKD SLQKVRLWLG TFDTAEEAAR  60
AYDTAARALR GANARTNFGL PESGTNGGVG AKRGSGSNFM LENTEPFSFE DVSDSGSGSE  120
HGLLGALKAK LFDGKEAKFS FSFPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.14e-19ERF family protein