PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

MCH98275.1

Organism

Trifolium medium

Taxonomic ID

97028

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium

Family

WOX

Protein Properties

Length: 177aa MW: 19130 Da PI: 9.2932

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
MCH98275.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	49.4	7.8e-16	30	90	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++eq+ +Le+ F++ +p ++e ++ k l + +++V++WFqNrR + ++ MCH98275.1 30 RSRWTPKPEQILILESIFNSgMVNPPKDETIRIRKLLekfgAVGDANVFYWFQNRRSRSRR 90 89***************99***********************************997 PP
2	Wus_type_Homeobox	107.9	6.2e-35	29	92	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtP+peQi iLe++++sG+++P+k+e+ ri++ Le++G+++d+NVfyWFQNr++R+r++q MCH98275.1 29 VRSRWTPKPEQILILESIFNSGMVNPPKDETIRIRKLLEKFGAVGDANVFYWFQNRRSRSRRRQ 92 689***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 177 aa Download sequence
MEDQQQKQHV QCQSSNANNP NNIEKSETVR SRWTPKPEQI LILESIFNSG MVNPPKDETI 60 RIRKLLEKFG AVGDANVFYW FQNRRSRSRR RQRQMQAAAQ LSGGSANPYH QYHCSTNSAN 120 SLSLGAAIGF GGSSNFTLNS SSCNSSYNNN FSGSSSSCGL GVGLGVGVGG GGEEGFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03660.1	1e-34	WOX family protein