PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH98278.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family E2F/DP
Protein Properties Length: 69aa    MW: 7759.88 Da    PI: 10.2237
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH98278.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP29.41.3e-092356237
     E2F_TDP  2 keksLrlltqkflklleksee.givtlnevakeLvse 37
                ++++Lr++++k   ++ek+e+ g++t+neva+eLv+e
  MCH98278.1 23 SGRGLRQFSMK---VCEKVESkGRTTYNEVADELVAE 56
                789********...*****999************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 69 aa     Download sequence    
MHYLCRSKKK KRGQQRAVGG DKSGRGLRQF SMKVCEKVES KGRTTYNEVA DELVAEFADP  60
INSVLSPDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.16e-29E2F/DP family protein