PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH98305.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family ERF
Protein Properties Length: 130aa    MW: 14739.6 Da    PI: 9.438
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH98305.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.21.5e-1187130353
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53 
                  +GV++  k+ +W A I++      +k+++lg+ g+ eeAa +++++  +l
  MCH98305.1  87 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAAHLYDRYYFEL 130
                 79**98..47*********4.....5********************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
PLPLYCENLT GSENSSWKAK PKCEKPMLSD DASILDSNTV VQEEPGSSNN SGSSSSKDQP  60
TQQTLGPPVK RRKRHRRKNL HSQEACMRGV YFKNMKWQAA IKVDKKQIHL GTVGSQEEAA  120
HLYDRYYFEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.22e-22ERF family protein