PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH98577.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family FAR1
Protein Properties Length: 182aa    MW: 21301.5 Da    PI: 8.6178
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH98577.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR150.56.7e-1611772790
        FAR1 27 eitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90
                 ++kr+fvC+++g++  ++k++ +++r r++ r+gC+ak+ ++ke     ++w v ++++ HnHel 
  MCH98577.1 11 GVYKRDFVCYRSGFAPVKRKANGEHQRDRKSVRCGCDAKMYLSKEVvdgVSQWFVVQFSNIHNHELL 77
                389*****************99**********************99867789*************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
KERSRISPQL GVYKRDFVCY RSGFAPVKRK ANGEHQRDRK SVRCGCDAKM YLSKEVVDGV  60
SQWFVVQFSN IHNHELLEDD QVRLLPAYRK IHEADQERIL LLSKAGFPIH RIVKMLEVEK  120
GIQGGHLPFL ERDVRNFVQN RKKIVQENEA LLSEKRENDV LELLEVCKAM KEADVEFVYD  180
FT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.15e-92FAR1 family protein