PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH98619.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family NAC
Protein Properties Length: 159aa    MW: 18165.6 Da    PI: 9.9586
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH98619.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM155.22.8e-48151431128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.... 95 
                 lppGfrF+Ptdeelv +yLk k+ + +l++ ++i+e++i+k++PwdLp   +++e ++yfFs ++ ky++g+r nr+t+sgyWkatg+dk+v ++    
  MCH98619.1  15 LPPGFRFQPTDEELVFQYLKCKTFSYQLPA-SIIPEINICKYDPWDLPG--NHGEPDMYFFSAKEAKYRNGNRMNRSTNSGYWKATGSDKKVSVSssis 110
                 79****************************.89***************4..45778************************************9987777 PP

         NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                 +g   g++k+Lvfy+g++p+g++t+W+mheyrl
  MCH98619.1 111 NGGIAGIRKSLVFYRGKSPNGTRTHWIMHEYRL 143
                 7778***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MEKIKFVKNG VSNKLPPGFR FQPTDEELVF QYLKCKTFSY QLPASIIPEI NICKYDPWDL  60
PGNHGEPDMY FFSAKEAKYR NGNRMNRSTN SGYWKATGSD KKVSVSSSIS NGGIAGIRKS  120
LVFYRGKSPN GTRTHWIMHE YRLVSVETTP CNQERHSSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.13e-58NAC family protein