PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH98843.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family B3
Protein Properties Length: 171aa    MW: 19121.3 Da    PI: 10.5133
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH98843.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3512.6e-162771896
                --HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
          B3 18 lpkkfaeehggkkeesktltledesgrsWevkliy.rkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96
                +p +f  +h   ++++++++l +++g+ W+v+    ++   + ++l +GW +Fv++ng+k+gD+++F+l+++ e   +v++
  MCH98843.1  2 IPYQFSMAHL--PNCNIKIILHNLKGEHWTVNSVTrTRVH-TnHTLCGGWLDFVRDNGIKVGDVCIFELIRECEL--RVHI 77
                8999998886..4699****************96533333.359999**********************996555..5655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
NIPYQFSMAH LPNCNIKIIL HNLKGEHWTV NSVTRTRVHT NHTLCGGWLD FVRDNGIKVG  60
DVCIFELIRE CELRVHIAEV GKDGLDSQIE KLASSMHSAR HDVACRKTSR YMPKNPKVSS  120
MCRNKVDLSN KKSSKIGQGA ALSILKKYGR ASNASKKMGI CPKSKAVHKK L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18000.17e-09B3 family protein