PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MCH99065.1
Organism
Trifolium medium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium
Family MYB_related
Protein Properties Length: 66aa    MW: 7873.93 Da    PI: 8.9657
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MCH99065.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.62.5e-07348347
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                     +WT+   +l+ +a + +  +   +W+ +a+ +g  ++ +++k ++  +
       MCH99065.1  3 SWTARQNKLFEEALAIYDREtpdRWHNVAKVVG--KSVEDVKRHYEVL 48
                     6*****************88************8..9*********876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 66 aa     Download sequence    
MASWTARQNK LFEEALAIYD RETPDRWHNV AKVVGKSVED VKRHYEVLKE DIKRIERGDV  60
PFPYKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.16e-28MYB_related family protein